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636-0113-00L 4 Credits DR , MSC D-BSSE , D-INFK
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Genome Engineering

Lecturers & Examiners: Prof. Dr. Randall Platt
The seminar is addressed primarily to students enrolled in the MSc Biotechnology.
VVZ CR n/a

Last Updated: 2026-02-05 16:38:20

Abstract

This course is both an introduction to genome engineering and also a highly interactive practical training on effectively reading, writing, and presenting in an academic context.

Objective

The objective of this course is to learn how gene editing technologies function at the molecular and cellular level and how they are applied in research and clinical settings. Students will be introduced to the history and motivation behind the discovery and development of transformative genome engineering technologies, and also gain insight into the ethical, safety, and regulatory facets shaping the field. This content will be explored by critically examining and discussing current literature in the field and devising a technology development plan.

Content

The course content is comprised of lectures, discussions, and a project. Lectures in Genome Engineering will be technology-focused and incorporate: 1) historical context to motivate the need for developing the technology, 2) development of the technology from concept to robust tool, 3) methods to discover, characterize, and evaluate the technology, and 4) applications of the technology in basic and applied research. Primary research articles will be assigned each week, which will be followed by an in-class lecture and discussion. The course project will be team-based and entail devising a solution to a critical need in the field. Main topics: --Discovery and development of genome editing technologies --The prokaryotic adaptive immune system CRISPR-Cas --Genome engineering methods for generating genetically engineered model systems --Genotype-phenotype linkage via genetic screens --Massively paralleled perturbation and phenotyping --Gene editing tools as molecular recording devices --Gene editing tools as diagnostics and therapeutics

Resources

Lecture Notes

Made available through the course website.

Literature

Assigned each week. Made available through the course website.

General Information

Language
English
Levels
DR , MSC
Frequency
Yearly recurring

Examination

Type
end-of-semester examination
Mode
written 90 minutes
Aids
None
Compulsory continuous performance assessment:1. Literature discussions2. Group project presentation3. Individual project reportThe student’s assignments will be graded and must be passed on their own. Students who do not pass the assignments are required to de-register from the exam and will otherwise be treated as a no show.

Registration & Places

Max Places
30
Priority: Registration for the course unit is until 05.02.2024 only possible for the primary target group

Course Components

Type Title Time & Place Hours
lecture Genome Engineering
This course will be held in person in Basel. The lecture will not take place on 21 February 2024 (Fasnacht in Basel).
  • Wed 14:15-17:00 (BSS E 21)
3 h weekly

Offered In