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751-5127-01L 1 Credits MSC , DR D-USYS
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Microbiomics II: Metabarcoding - From Bioinformatics to Statistics

Lecturers & Examiners: Prof. Dr. Martin Hartmann
The course 751-5127-00 Microbiomics I: The microbiome of the plant-soil system is a prerequisit of this course (only for MSc students). Master and PhD-students from the ETH Zurich should register through myStudies. All other PhD-students should register via the (> Select Plant Sciences)
VVZ CR n/a

Last Updated: 2026-02-05 16:22:09

Abstract

This computer block course provides a thorough introduction to the application of next-generation sequencing techniques for analyzing diversity of microbial communities. Using a combination of theoretical lectures and hands-on computer exercises, the participants learn the computational steps from bioinformatic processing of sequencing reads down to the final statistical evaluations.

Objective

After the course, the participants will be able to 1) understand the concept, potential and limitation of microbial NGS applications 2) know how to process raw metabarcoding data to obtain meaningful information 3) use multivariate statistical methods evaluate and visualize microbial community data 4) make informed decisions on best practices for their own data

General Information

Language
English
Levels
MSC , DR
Frequency
Yearly recurring

Examination

Type
ungraded semester performance

Registration & Places

Max Places
16
Signup End
05.06.2023

Course Components

Type Title Time & Place Hours
practical/laboratory course Microbiomics II: Metabarcoding - From Bioinformatics to Statistics
Block course from 12.-15.6.2023
  • 12.06 Date 08:15-18:00 (LFW B 2)
  • 13.06 Date 08:15-11:00 (LFW B 2)
  • 13.06 Date 14:15-18:00 (LFW B 2)
  • 14.06 Date 08:15-11:00 (LFW B 2)
  • 14.06 Date 14:15-18:00 (LFW B 2)
  • 15.06 Date 08:15-18:00 (LFW B 2)
30 h semesterly

Offered In